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| Ultimate™ ORFCard for Clone ID IOH27914 | |
|---|---|
| Gene Information | |
| Clone ID: | IOH27914 |
| Organism: | Homo sapiens |
| Matching Nucleotide Accession: | BC015006.1|Alignment |
| Category: | 9478 |
| Comment: | HS.458482 |
| Related Accession(s): | AF169148|Alignment || AF169149|Alignment || AK127203|Alignment || BC015006|Alignment || BC030201|Alignment || BM716422|Alignment || BQ188859|Alignment || X94700|Alignment |
| Gene Name: | calcium binding protein 1 (calbrain) |
| Gene Definition: | Homo sapiens, calcium binding protein 1 (calbrain), mRNA (cDNA cloneMGC:23595 IMAGE:4857304), complete cds. |
| Gene Symbol: | CABP1 |
| Summary: | The product of this gene belongs to a subfamily of calcium binding proteins, which share similarity to calmodulin. Calcium binding proteins are an important component of calcium mediated cellular signal transduction. Expression of this gene was only detected in retina and brain. Study of the mouse homolog demonstrated that groups of cells expressing this protein are located in the center or inner border of the inner unclear layer of retina. Two alternatively spliced variants encoding different isoforms have been described. |
| Expression: | Sage Tag Expression || Virtual Northern || Digital Expression Profile |
| Transcript Variant 1: | This variant (1) encodes the full length protein. |
| Transcript Variant 2: | This variant (2) lacks an internal exon; the reading frame is maintained but the resulting protein is shorter by 60 aa. |
| mRNA Record: | NM_004276|Alignment || NM_031205|Alignment |
| GO Category: molecular function | calcium ion binding (GO:0005509) calcium ion binding (GO:0005509) enzyme inhibitor activity (GO:0004857) |
| References: | GRIF: 9478 | PUBMED: CABP1 |
| ORF Information | |
| ORF length (bp): | 915 |
| Sequence: | Nucleotide || Peptide || Translation || Quality Scores || Quality Scores with Sequence |
| Clone Information | |
| Collection Name: | Ultimate ORF Clones |
| Collection Type: | ORF Gateway™ Entry |
| Vector Name: | pENTR(tm)221 |
| Vector Antibiotic: | Kanamycin |
| Host Name: | E.coli |
| Protein | |
| Protein Accession: | AAF25782|Alignment || AAF25783|Alignment || AAH30201|Alignment || CAA64361|Alignment || Q9NZU7|Alignment |
| Protein Record: | NP_004267|Alignment || NP_112482|Alignment |
| Physical Properties: | (aa) || 0.0 (MW) || 0.0 (pI) |
| Protease Digestion: | Trypsin | Lys-C | Arg-C | Asp-N | V8-bicarb | V8-phosph | Chymotrypsin | CNBr |
| Predicted Secondary Structure: | View Secondary Structure |
| Protein Model Search: | Swiss-Model BLAST |
| OMIM: | 605563 |
| Product: | calcium binding protein 1 isoform 2 |
| SNP Information | |
| SNP: | All rs in gene region | rs in coding region only | rs with heterozygosity only |
| SNP Map to: | Protein |
| Genomic Link | |
| LocusLink ID: | 9478 |
| Unigene ID: | Hs.458482 |
| Genome Alignment: | Map to Human Genome using BLAT || Map to Ensembl Genome Browser |
|
Disclaimer: Invitrogen™ Corporation provides an evolving clone collection where each gene represented is identified as containing a complete open reading frame, based on a dynamic source of bioinformatic information contained within GenBank. GenBank is a genetic sequence database, which contains an annotated collection of all publicly available DNA sequences. Ultimate™ ORF Clones are typically derived from cDNA clones believed to contain a complete open reading frame, according to the most current GenBank update. Please note, subsequent GenBank updates may show some of these cDNA clones to contain a partial sequence, a non-coding sequence or other artifacts. Quarterly, Invitrogen™ Corporation will update the Ultimate™ ORF Clone Collection, by adding, deleting, or modifying the bioinformatic information to more accurately reflect the most current scientific information associated with each of the clones represented in the collection. It is highly recommended that the purchaser carefully evaluate the ORF clone sequence prior to purchase. It is the purchaser’s responsibility to check whether the sequence associated with any particular clone meets his/her scientific requirement prior to purchase. Invitrogen makes no warranties, express or implied, that the manufacture, use, importation, or sale of the gene contained within any Ultimate™ ORF clone will not infringe any third party intellectual property right. | |